Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm1848-201ENSMUST00000120711 789 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm19994-201ENSMUST00000217086 586 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm28882-201ENSMUST00000185504 314 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm45856-201ENSMUST00000212752 416 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm13182-201ENSMUST00000122241 312 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm16071-201ENSMUST00000119589 793 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm25998-201ENSMUST00000175397 53 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm17826-201ENSMUST00000189720 798 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smg1Q8BKX6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm23771-201ENSMUST00000178702 110 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms