Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Atg4dQ8BGV9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Atg4dQ8BGV9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atg4dQ8BGV9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atg4dQ8BGV9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atg4dQ8BGV9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms