Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm6244-201ENSMUST00000178732 841 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Mir7221-201ENSMUST00000184009 72 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm44397-201ENSMUST00000195950 113 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Gm17794-201ENSMUST00000220252 955 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Samm50Q8BGH2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Samm50Q8BGH2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Samm50Q8BGH2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Samm50Q8BGH2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Mir1894-201ENSMUST00000122802 81 ntBASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm5035-201ENSMUST00000215581 927 ntBASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Samm50Q8BGH2 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm43433-201ENSMUST00000196573 481 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms