Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trim62Q80V85 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trim62Q80V85 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.42□□□□□ -0.26
Trim62Q80V85 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim62Q80V85 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trim62Q80V85 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim62Q80V85 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim62Q80V85 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trim62Q80V85 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm25927-201ENSMUST00000175058 117 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm27514-201ENSMUST00000183692 110 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim62Q80V85 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Rubie-203ENSMUST00000227803 2430 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.41□□□□□ -0.26
Trim62Q80V85 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm12742-201ENSMUST00000117326 410 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm12363-201ENSMUST00000122250 668 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trim62Q80V85 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim62Q80V85 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.4□□□□□ -0.26
Trim62Q80V85 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim62Q80V85 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim62Q80V85 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms