Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm8959-201ENSMUST00000213150 571 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf38bQ80SY5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm11222-201ENSMUST00000119005 738 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm4986-201ENSMUST00000119731 549 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm22119-201ENSMUST00000175594 99 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf38bQ80SY5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Mir698-201ENSMUST00000102164 109 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Gm8805-201ENSMUST00000117848 313 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Gm25261-201ENSMUST00000157416 134 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.62□□□□□ -0.23
Prpf38bQ80SY5 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms