Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pif1Q80SX8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm22323-201ENSMUST00000103832 109 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm3890-201ENSMUST00000182416 207 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Gm9877-201ENSMUST00000064271 2627 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pif1Q80SX8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pif1Q80SX8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.04□□□□□ -0.48
Pif1Q80SX8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Mir433-201ENSMUST00000093564 124 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.03□□□□□ -0.48
Pif1Q80SX8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pif1Q80SX8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.02□□□□□ -0.48
Pif1Q80SX8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pif1Q80SX8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms