Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm7584-201ENSMUST00000175829 940 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm42627-201ENSMUST00000197347 224 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm18935-201ENSMUST00000212692 664 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb4Q6P8W9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm25261-201ENSMUST00000157416 134 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm3961-201ENSMUST00000204425 994 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb4Q6P8W9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Gm13350-201ENSMUST00000120519 479 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Gm6334-201ENSMUST00000207083 228 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Gm10608-202ENSMUST00000213924 676 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Gm24526-201ENSMUST00000082921 158 ntBASIC13.59□□□□□ -0.23
Hmgb4Q6P8W9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms