Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VclQ64727 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
VclQ64727 Gm12742-201ENSMUST00000117326 410 ntBASIC12.78□□□□□ -0.36
VclQ64727 Gm16177-201ENSMUST00000120728 718 ntBASIC12.78□□□□□ -0.36
VclQ64727 Gm1335-201ENSMUST00000121653 386 ntBASIC12.78□□□□□ -0.36
VclQ64727 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.78□□□□□ -0.36
VclQ64727 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Grk6-205ENSMUST00000224653 2976 ntBASIC12.78□□□□□ -0.36
VclQ64727 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.78□□□□□ -0.36
VclQ64727 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.78□□□□□ -0.36
VclQ64727 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.78□□□□□ -0.36
VclQ64727 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VclQ64727 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
VclQ64727 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.77□□□□□ -0.36
VclQ64727 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
VclQ64727 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VclQ64727 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
VclQ64727 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VclQ64727 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
VclQ64727 Gm8805-201ENSMUST00000117848 313 ntBASIC12.77□□□□□ -0.37
VclQ64727 Gm11978-201ENSMUST00000122315 466 ntBASIC12.77□□□□□ -0.37
VclQ64727 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.77□□□□□ -0.37
VclQ64727 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VclQ64727 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.77□□□□□ -0.37
VclQ64727 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.77□□□□□ -0.37
VclQ64727 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.77□□□□□ -0.37
VclQ64727 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.77□□□□□ -0.37
VclQ64727 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.77□□□□□ -0.37
VclQ64727 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.77□□□□□ -0.37
VclQ64727 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.77□□□□□ -0.37
VclQ64727 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.77□□□□□ -0.37
VclQ64727 Gm10268-201ENSMUST00000085340 555 ntBASIC12.77□□□□□ -0.37
VclQ64727 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.77□□□□□ -0.37
VclQ64727 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.77□□□□□ -0.37
VclQ64727 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.77□□□□□ -0.37
VclQ64727 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VclQ64727 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.76□□□□□ -0.37
VclQ64727 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.76□□□□□ -0.37
VclQ64727 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.76□□□□□ -0.37
VclQ64727 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.76□□□□□ -0.37
VclQ64727 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.76□□□□□ -0.37
VclQ64727 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 Gm26927-201ENSMUST00000182385 965 ntBASIC12.76□□□□□ -0.37
VclQ64727 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms