Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Mir3102-201ENSMUST00000175555 104 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm4804-201ENSMUST00000182234 999 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.87□□□□□ -0.67
Znf48Q3US17 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.87□□□□□ -0.67
Znf48Q3US17 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm43435-201ENSMUST00000199996 1438 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm12928-201ENSMUST00000117115 573 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm29649-201ENSMUST00000185649 419 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm18827-201ENSMUST00000188341 790 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm7287-201ENSMUST00000205267 602 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm8463-201ENSMUST00000208573 613 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.86□□□□□ -0.67
Znf48Q3US17 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Znf48Q3US17 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Znf48Q3US17 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Znf48Q3US17 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms