Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm11450-201ENSMUST00000121144 333 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm29615-201ENSMUST00000185371 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28224-201ENSMUST00000186078 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm29001-201ENSMUST00000186177 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28292-201ENSMUST00000186593 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28101-201ENSMUST00000187608 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm29076-201ENSMUST00000187689 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28302-201ENSMUST00000187931 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28646-201ENSMUST00000188220 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28205-201ENSMUST00000189177 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm29032-201ENSMUST00000189797 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm28695-201ENSMUST00000190300 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm37448-201ENSMUST00000192795 697 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 AC154252.2-201ENSMUST00000223593 767 ntBASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Arhgef40Q3UPH7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Gm18304-201ENSMUST00000189162 546 ntBASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arhgef40Q3UPH7 Gm45342-201ENSMUST00000210903 1363 ntBASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Gm24934-201ENSMUST00000103764 111 ntBASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Gm9062-201ENSMUST00000117712 727 ntBASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arhgef40Q3UPH7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Arhgef40Q3UPH7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Arhgef40Q3UPH7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Arhgef40Q3UPH7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Arhgef40Q3UPH7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm24231-201ENSMUST00000104315 133 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm27627-201ENSMUST00000183644 150 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm8365-201ENSMUST00000197334 648 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm6781-201ENSMUST00000038304 1242 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms