Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gm6023-201ENSMUST00000118217 606 ntBASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gm13786-201ENSMUST00000122371 333 ntBASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rufy4Q3TYX8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rufy4Q3TYX8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Gm10608-202ENSMUST00000213924 676 ntBASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Cts7-204ENSMUST00000225321 1257 ntBASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rufy4Q3TYX8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm13316-201ENSMUST00000140537 691 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm29396-201ENSMUST00000185659 716 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm18584-201ENSMUST00000203098 964 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm18935-201ENSMUST00000212692 664 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Gm8227-201ENSMUST00000223306 571 ntBASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rufy4Q3TYX8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms