Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm21854-201ENSMUST00000179901 471 ntBASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm10576-201ENSMUST00000191927 825 ntBASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptchd3Q0EEE2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm16215-201ENSMUST00000161990 637 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Auts2-212ENSMUST00000178555 309 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.52□□□□□ -0.41
Ptchd3Q0EEE2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptchd3Q0EEE2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms