Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm12712-201ENSMUST00000120676 801 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm16167-201ENSMUST00000160428 1065 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm6564-201ENSMUST00000075377 619 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PrkdcP97313 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm24934-201ENSMUST00000103764 111 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC8.55□□□□□ -1.04
PrkdcP97313 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm12419-201ENSMUST00000116649 636 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm29763-201ENSMUST00000205306 616 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
PrkdcP97313 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm17214-201ENSMUST00000164501 541 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC8.54□□□□□ -1.04
PrkdcP97313 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 AC134537.1-201ENSMUST00000219205 265 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm24954-201ENSMUST00000178831 110 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Gm9116-201ENSMUST00000192400 1018 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
PrkdcP97313 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PrkdcP97313 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC8.54□□□□□ -1.04
PrkdcP97313 Gm44401-201ENSMUST00000204462 2375 ntBASIC8.54□□□□□ -1.04
PrkdcP97313 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PrkdcP97313 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Ighv1-48-201ENSMUST00000191795 294 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Gm38228-201ENSMUST00000193169 1293 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Mir326-201ENSMUST00000083637 95 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PrkdcP97313 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC8.53□□□□□ -1.04
PrkdcP97313 Gm11560-201ENSMUST00000117567 948 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC8.53□□□□□ -1.04
PrkdcP97313 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms