Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Mir1897-201ENSMUST00000122581 272 ntBASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.85□□□□□ -0.35
Crnkl1P63154 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm38294-201ENSMUST00000192831 381 ntBASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm44344-201ENSMUST00000200287 129 ntBASIC12.85□□□□□ -0.35
Crnkl1P63154 Dupd1-202ENSMUST00000224735 548 ntBASIC12.85□□□□□ -0.35
Crnkl1P63154 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm13223-201ENSMUST00000118609 747 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm15653-201ENSMUST00000119247 907 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Mir7221-201ENSMUST00000184009 72 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm18027-201ENSMUST00000218947 619 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm16476-201ENSMUST00000221544 139 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Shd-206ENSMUST00000225145 998 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Mir125a-201ENSMUST00000083545 68 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Crnkl1P63154 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.84□□□□□ -0.35
Crnkl1P63154 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Crnkl1P63154 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Crnkl1P63154 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Crnkl1P63154 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Crnkl1P63154 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Crnkl1P63154 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.83□□□□□ -0.36
Crnkl1P63154 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.83□□□□□ -0.36
Crnkl1P63154 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Crnkl1P63154 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms