Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a1P61620 Mir497b-201ENSMUST00000093601 125 ntBASIC11.46□□□□□ -0.57
Sec61a1P61620 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.46□□□□□ -0.58
Sec61a1P61620 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.46□□□□□ -0.58
Sec61a1P61620 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sec61a1P61620 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.46□□□□□ -0.58
Sec61a1P61620 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sec61a1P61620 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sec61a1P61620 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Sec61a1P61620 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.46□□□□□ -0.58
Sec61a1P61620 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a1P61620 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Mir698-201ENSMUST00000102164 109 ntBASIC11.45□□□□□ -0.58
Sec61a1P61620 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Mir6392-201ENSMUST00000184924 108 ntBASIC11.45□□□□□ -0.58
Sec61a1P61620 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.45□□□□□ -0.58
Sec61a1P61620 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a1P61620 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.45□□□□□ -0.58
Sec61a1P61620 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sec61a1P61620 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a1P61620 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm15240-201ENSMUST00000118156 720 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm13385-201ENSMUST00000121089 220 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.44□□□□□ -0.58
Sec61a1P61620 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a1P61620 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm8927-201ENSMUST00000181978 981 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm5279-201ENSMUST00000199575 745 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm5425-201ENSMUST00000214125 459 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm19220-201ENSMUST00000222682 803 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Gm3222-201ENSMUST00000071282 990 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a1P61620 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms