Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14□□□□□ -0.17
Nub1P54729 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Gm45684-201ENSMUST00000210244 1571 ntBASIC14□□□□□ -0.17
Nub1P54729 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nub1P54729 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nub1P54729 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.99□□□□□ -0.17
Nub1P54729 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.99□□□□□ -0.17
Nub1P54729 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.99□□□□□ -0.17
Nub1P54729 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.99□□□□□ -0.17
Nub1P54729 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.99□□□□□ -0.17
Nub1P54729 Gm8805-201ENSMUST00000117848 313 ntBASIC13.99□□□□□ -0.17
Nub1P54729 Gm13369-201ENSMUST00000119442 987 ntBASIC13.99□□□□□ -0.17
Nub1P54729 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.99□□□□□ -0.17
Nub1P54729 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.99□□□□□ -0.17
Nub1P54729 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.99□□□□□ -0.17
Nub1P54729 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.99□□□□□ -0.17
Nub1P54729 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nub1P54729 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nub1P54729 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nub1P54729 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nub1P54729 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.98□□□□□ -0.17
Nub1P54729 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Gm12390-201ENSMUST00000117897 397 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.98□□□□□ -0.17
Nub1P54729 Gm24644-201ENSMUST00000157114 139 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.98□□□□□ -0.17
Nub1P54729 Gm27331-201ENSMUST00000183705 60 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.98□□□□□ -0.17
Nub1P54729 Gm37922-201ENSMUST00000195596 455 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Nub1P54729 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.98□□□□□ -0.17
Nub1P54729 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nub1P54729 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nub1P54729 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.98□□□□□ -0.17
Nub1P54729 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.98□□□□□ -0.17
Nub1P54729 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nub1P54729 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nub1P54729 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nub1P54729 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms