Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.14□□□□□ -0.31
Lhx3P50481 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lhx3P50481 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Lhx3P50481 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lhx3P50481 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lhx3P50481 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lhx3P50481 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lhx3P50481 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.13□□□□□ -0.31
Lhx3P50481 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lhx3P50481 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Lhx3P50481 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.13□□□□□ -0.31
Lhx3P50481 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Lhx3P50481 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Gm8738-201ENSMUST00000172606 329 ntBASIC13.13□□□□□ -0.31
Lhx3P50481 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Gm38158-201ENSMUST00000194617 339 ntBASIC13.13□□□□□ -0.31
Lhx3P50481 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lhx3P50481 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lhx3P50481 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lhx3P50481 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.12□□□□□ -0.31
Lhx3P50481 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Lhx3P50481 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.12□□□□□ -0.31
Lhx3P50481 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.12□□□□□ -0.31
Lhx3P50481 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm5781-201ENSMUST00000219792 443 ntBASIC13.12□□□□□ -0.31
Lhx3P50481 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lhx3P50481 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.12□□□□□ -0.31
Lhx3P50481 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.12□□□□□ -0.31
Lhx3P50481 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lhx3P50481 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm12502-201ENSMUST00000120197 444 ntBASIC13.11□□□□□ -0.31
Lhx3P50481 Gm11793-201ENSMUST00000120433 981 ntBASIC13.11□□□□□ -0.31
Lhx3P50481 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm24548-201ENSMUST00000158650 108 ntBASIC13.11□□□□□ -0.31
Lhx3P50481 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.11□□□□□ -0.31
Lhx3P50481 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lhx3P50481 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Lhx3P50481 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Lhx3P50481 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx3P50481 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms