Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.48□□□□□ -0.41
Prox1P48437 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.48□□□□□ -0.41
Prox1P48437 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Prox1P48437 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prox1P48437 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.47□□□□□ -0.41
Prox1P48437 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.47□□□□□ -0.41
Prox1P48437 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.47□□□□□ -0.41
Prox1P48437 Gm18905-201ENSMUST00000205454 928 ntBASIC12.47□□□□□ -0.41
Prox1P48437 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Prox1P48437 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.47□□□□□ -0.41
Prox1P48437 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prox1P48437 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Prox1P48437 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Prox1P48437 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Prox1P48437 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.46□□□□□ -0.41
Prox1P48437 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.46□□□□□ -0.41
Prox1P48437 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.46□□□□□ -0.41
Prox1P48437 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.46□□□□□ -0.41
Prox1P48437 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.46□□□□□ -0.41
Prox1P48437 Gm27680-201ENSMUST00000184192 160 ntBASIC12.46□□□□□ -0.41
Prox1P48437 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.46□□□□□ -0.41
Prox1P48437 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.46□□□□□ -0.41
Prox1P48437 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.46□□□□□ -0.41
Prox1P48437 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prox1P48437 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prox1P48437 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.46□□□□□ -0.42
Prox1P48437 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prox1P48437 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms