Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Sox6P40645 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Mir874-201ENSMUST00000104769 76 ntBASIC12.2□□□□□ -0.46
Sox6P40645 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.2□□□□□ -0.46
Sox6P40645 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox6P40645 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sox6P40645 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Gm37917-201ENSMUST00000194711 392 ntBASIC12.2□□□□□ -0.46
Sox6P40645 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox6P40645 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox6P40645 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox6P40645 Gm11524-201ENSMUST00000119349 807 ntBASIC12.19□□□□□ -0.46
Sox6P40645 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.19□□□□□ -0.46
Sox6P40645 Gm12485-201ENSMUST00000119641 291 ntBASIC12.19□□□□□ -0.46
Sox6P40645 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.19□□□□□ -0.46
Sox6P40645 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.19□□□□□ -0.46
Sox6P40645 Gm43094-201ENSMUST00000196549 921 ntBASIC12.19□□□□□ -0.46
Sox6P40645 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox6P40645 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox6P40645 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox6P40645 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox6P40645 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.18□□□□□ -0.46
Sox6P40645 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.18□□□□□ -0.46
Sox6P40645 Gm19078-201ENSMUST00000206311 727 ntBASIC12.18□□□□□ -0.46
Sox6P40645 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox6P40645 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox6P40645 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms