Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
Timp3P39876 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.66□□□□□ -0.7
Timp3P39876 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.66□□□□□ -0.7
Timp3P39876 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.66□□□□□ -0.7
Timp3P39876 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Gm29608-201ENSMUST00000190444 463 ntBASIC10.66□□□□□ -0.7
Timp3P39876 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.66□□□□□ -0.7
Timp3P39876 Gm42693-201ENSMUST00000196779 631 ntBASIC10.66□□□□□ -0.7
Timp3P39876 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.66□□□□□ -0.7
Timp3P39876 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Timp3P39876 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.66□□□□□ -0.7
Timp3P39876 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Timp3P39876 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Timp3P39876 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.66□□□□□ -0.7
Timp3P39876 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Timp3P39876 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Timp3P39876 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.66□□□□□ -0.7
Timp3P39876 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Timp3P39876 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gm12203-201ENSMUST00000118235 598 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Gm12209-201ENSMUST00000120089 596 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.65□□□□□ -0.7
Timp3P39876 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.65□□□□□ -0.7
Timp3P39876 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.65□□□□□ -0.7
Timp3P39876 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.65□□□□□ -0.7
Timp3P39876 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Gm27514-201ENSMUST00000183692 110 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.65□□□□□ -0.7
Timp3P39876 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Timp3P39876 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Timp3P39876 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Timp3P39876 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms