Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.93□□□□□ -0.34
LdlrP35951 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LdlrP35951 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.93□□□□□ -0.34
LdlrP35951 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.93□□□□□ -0.34
LdlrP35951 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LdlrP35951 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.93□□□□□ -0.34
LdlrP35951 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LdlrP35951 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LdlrP35951 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.92□□□□□ -0.34
LdlrP35951 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LdlrP35951 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LdlrP35951 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LdlrP35951 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LdlrP35951 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LdlrP35951 Gm12742-201ENSMUST00000117326 410 ntBASIC12.92□□□□□ -0.34
LdlrP35951 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.92□□□□□ -0.34
LdlrP35951 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.92□□□□□ -0.34
LdlrP35951 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.92□□□□□ -0.34
LdlrP35951 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LdlrP35951 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LdlrP35951 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.91□□□□□ -0.34
LdlrP35951 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.91□□□□□ -0.34
LdlrP35951 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Gm38144-201ENSMUST00000192790 465 ntBASIC12.91□□□□□ -0.34
LdlrP35951 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LdlrP35951 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LdlrP35951 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LdlrP35951 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms