Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cd48P18181 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cd48P18181 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd48P18181 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cd48P18181 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cd48P18181 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.66□□□□□ -0.54
Cd48P18181 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.66□□□□□ -0.54
Cd48P18181 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cd48P18181 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.66□□□□□ -0.54
Cd48P18181 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.66□□□□□ -0.54
Cd48P18181 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd48P18181 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cd48P18181 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.65□□□□□ -0.54
Cd48P18181 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd48P18181 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.65□□□□□ -0.54
Cd48P18181 Gm12151-201ENSMUST00000121374 290 ntBASIC11.65□□□□□ -0.54
Cd48P18181 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cd48P18181 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.65□□□□□ -0.54
Cd48P18181 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd48P18181 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd48P18181 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd48P18181 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cd48P18181 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.65□□□□□ -0.55
Cd48P18181 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cd48P18181 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cd48P18181 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cd48P18181 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.64□□□□□ -0.55
Cd48P18181 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cd48P18181 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cd48P18181 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cd48P18181 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd48P18181 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms