Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.76□□□□□ -0.21
TnfP06804 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TnfP06804 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TnfP06804 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.75□□□□□ -0.21
TnfP06804 Gm13316-201ENSMUST00000140537 691 ntBASIC13.75□□□□□ -0.21
TnfP06804 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Gm7584-201ENSMUST00000175829 940 ntBASIC13.75□□□□□ -0.21
TnfP06804 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TnfP06804 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Morn2-202ENSMUST00000227729 656 ntBASIC13.75□□□□□ -0.21
TnfP06804 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.75□□□□□ -0.21
TnfP06804 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TnfP06804 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TnfP06804 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.75□□□□□ -0.21
TnfP06804 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TnfP06804 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TnfP06804 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TnfP06804 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.74□□□□□ -0.21
TnfP06804 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.74□□□□□ -0.21
TnfP06804 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.74□□□□□ -0.21
TnfP06804 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.74□□□□□ -0.21
TnfP06804 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.74□□□□□ -0.21
TnfP06804 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.74□□□□□ -0.21
TnfP06804 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.74□□□□□ -0.21
TnfP06804 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.74□□□□□ -0.21
TnfP06804 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.74□□□□□ -0.21
TnfP06804 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.74□□□□□ -0.21
TnfP06804 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.74□□□□□ -0.21
TnfP06804 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TnfP06804 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TnfP06804 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TnfP06804 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.73□□□□□ -0.21
TnfP06804 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.73□□□□□ -0.21
TnfP06804 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TnfP06804 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.73□□□□□ -0.21
TnfP06804 Gm38092-201ENSMUST00000195600 653 ntBASIC13.73□□□□□ -0.21
TnfP06804 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TnfP06804 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms