Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04213 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04213 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04213 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04213 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04213 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.43□□□□□ -0.42
P04213 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
P04213 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.42□□□□□ -0.42
P04213 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.42□□□□□ -0.42
P04213 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
P04213 Gm8805-201ENSMUST00000117848 313 ntBASIC12.42□□□□□ -0.42
P04213 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Gm13123-201ENSMUST00000122173 492 ntBASIC12.42□□□□□ -0.42
P04213 Gm12138-201ENSMUST00000122180 951 ntBASIC12.42□□□□□ -0.42
P04213 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.42□□□□□ -0.42
P04213 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.42□□□□□ -0.42
P04213 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
P04213 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.42□□□□□ -0.42
P04213 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.42□□□□□ -0.42
P04213 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
P04213 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.42□□□□□ -0.42
P04213 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04213 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P04213 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.41□□□□□ -0.42
P04213 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.41□□□□□ -0.42
P04213 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
P04213 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.41□□□□□ -0.42
P04213 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P04213 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Gm7287-201ENSMUST00000205267 602 ntBASIC12.41□□□□□ -0.42
P04213 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.41□□□□□ -0.42
P04213 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Gm16372-201ENSMUST00000073088 450 ntBASIC12.41□□□□□ -0.42
P04213 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.41□□□□□ -0.42
P04213 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
P04213 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
P04213 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04213 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.4□□□□□ -0.42
P04213 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.4□□□□□ -0.42
P04213 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04213 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.4□□□□□ -0.42
P04213 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms