Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.84□□□□□ -0.67
CfdP03953 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CfdP03953 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
CfdP03953 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.84□□□□□ -0.67
CfdP03953 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.84□□□□□ -0.67
CfdP03953 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CfdP03953 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.84□□□□□ -0.67
CfdP03953 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.84□□□□□ -0.67
CfdP03953 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.84□□□□□ -0.67
CfdP03953 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CfdP03953 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.84□□□□□ -0.67
CfdP03953 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.84□□□□□ -0.67
CfdP03953 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CfdP03953 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
CfdP03953 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.83□□□□□ -0.68
CfdP03953 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.83□□□□□ -0.68
CfdP03953 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.83□□□□□ -0.68
CfdP03953 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.83□□□□□ -0.68
CfdP03953 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.83□□□□□ -0.68
CfdP03953 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
CfdP03953 Gm5161-201ENSMUST00000075243 853 ntBASIC10.83□□□□□ -0.68
CfdP03953 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.83□□□□□ -0.68
CfdP03953 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CfdP03953 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CfdP03953 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.82□□□□□ -0.68
CfdP03953 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
CfdP03953 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm43474-201ENSMUST00000196415 774 ntBASIC10.82□□□□□ -0.68
CfdP03953 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CfdP03953 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.82□□□□□ -0.68
CfdP03953 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.82□□□□□ -0.68
CfdP03953 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CfdP03953 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CfdP03953 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms