Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.39□□□□□ -0.27
CopeO89079 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopeO89079 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopeO89079 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopeO89079 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CopeO89079 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopeO89079 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.39□□□□□ -0.27
CopeO89079 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CopeO89079 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CopeO89079 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.38□□□□□ -0.27
CopeO89079 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CopeO89079 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Gm21854-201ENSMUST00000179901 471 ntBASIC13.38□□□□□ -0.27
CopeO89079 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.38□□□□□ -0.27
CopeO89079 Gm20445-201ENSMUST00000061905 565 ntBASIC13.38□□□□□ -0.27
CopeO89079 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.38□□□□□ -0.27
CopeO89079 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CopeO89079 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CopeO89079 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Gm23935-201ENSMUST00000102303 57 ntBASIC13.37□□□□□ -0.27
CopeO89079 Gm24270-201ENSMUST00000102326 57 ntBASIC13.37□□□□□ -0.27
CopeO89079 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CopeO89079 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.37□□□□□ -0.27
CopeO89079 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Gm24245-201ENSMUST00000157318 57 ntBASIC13.37□□□□□ -0.27
CopeO89079 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.37□□□□□ -0.27
CopeO89079 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.37□□□□□ -0.27
CopeO89079 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.37□□□□□ -0.27
CopeO89079 Gm26315-201ENSMUST00000083890 321 ntBASIC13.37□□□□□ -0.27
CopeO89079 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.37□□□□□ -0.27
CopeO89079 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.37□□□□□ -0.27
CopeO89079 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.37□□□□□ -0.27
CopeO89079 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.37□□□□□ -0.27
CopeO89079 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CopeO89079 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopeO89079 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.36□□□□□ -0.27
CopeO89079 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CopeO89079 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
CopeO89079 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopeO89079 Gm13616-201ENSMUST00000120600 222 ntBASIC13.36□□□□□ -0.27
CopeO89079 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms