Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CrxO54751 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.43□□□□□ -0.9
CrxO54751 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.43□□□□□ -0.9
CrxO54751 Gm16198-201ENSMUST00000118766 670 ntBASIC9.43□□□□□ -0.9
CrxO54751 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.43□□□□□ -0.9
CrxO54751 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.43□□□□□ -0.9
CrxO54751 Gm5864-201ENSMUST00000202263 970 ntBASIC9.43□□□□□ -0.9
CrxO54751 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.43□□□□□ -0.9
CrxO54751 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.43□□□□□ -0.9
CrxO54751 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.43□□□□□ -0.9
CrxO54751 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
CrxO54751 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CrxO54751 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.43□□□□□ -0.9
CrxO54751 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
CrxO54751 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.43□□□□□ -0.9
CrxO54751 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
CrxO54751 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CrxO54751 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.42□□□□□ -0.9
CrxO54751 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.42□□□□□ -0.9
CrxO54751 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Gm12882-201ENSMUST00000121696 517 ntBASIC9.42□□□□□ -0.9
CrxO54751 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Mir5126-201ENSMUST00000175513 77 ntBASIC9.42□□□□□ -0.9
CrxO54751 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Gm28659-201ENSMUST00000188013 759 ntBASIC9.42□□□□□ -0.9
CrxO54751 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.42□□□□□ -0.9
CrxO54751 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.42□□□□□ -0.9
CrxO54751 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.42□□□□□ -0.9
CrxO54751 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CrxO54751 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.41□□□□□ -0.9
CrxO54751 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CrxO54751 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CrxO54751 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
CrxO54751 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CrxO54751 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms