Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Npc1O35604 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.68□□□□□ -0.38
Npc1O35604 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.68□□□□□ -0.38
Npc1O35604 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.68□□□□□ -0.38
Npc1O35604 Gm9899-201ENSMUST00000065519 555 ntBASIC12.68□□□□□ -0.38
Npc1O35604 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.68□□□□□ -0.38
Npc1O35604 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npc1O35604 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.68□□□□□ -0.38
Npc1O35604 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.68□□□□□ -0.38
Npc1O35604 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.67□□□□□ -0.38
Npc1O35604 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.67□□□□□ -0.38
Npc1O35604 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.67□□□□□ -0.38
Npc1O35604 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Npc1O35604 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Npc1O35604 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.67□□□□□ -0.38
Npc1O35604 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Npc1O35604 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Mir7221-201ENSMUST00000184009 72 ntBASIC12.67□□□□□ -0.38
Npc1O35604 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.67□□□□□ -0.38
Npc1O35604 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.67□□□□□ -0.38
Npc1O35604 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Npc1O35604 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.67□□□□□ -0.38
Npc1O35604 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Npc1O35604 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npc1O35604 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Gm12957-201ENSMUST00000117835 377 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm1335-201ENSMUST00000121653 386 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.66□□□□□ -0.38
Npc1O35604 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.66□□□□□ -0.38
Npc1O35604 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Npc1O35604 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Gm37424-201ENSMUST00000191727 561 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.66□□□□□ -0.38
Npc1O35604 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.66□□□□□ -0.38
Npc1O35604 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms