Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Colca2F8VPY8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Colca2F8VPY8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Colca2F8VPY8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gm270-201ENSMUST00000223010 976 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Colca2F8VPY8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm22133-201ENSMUST00000102082 109 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm7851-201ENSMUST00000117574 323 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm12501-201ENSMUST00000119163 529 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm8365-201ENSMUST00000197334 648 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm45550-201ENSMUST00000209380 946 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm1821-202ENSMUST00000227415 750 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Gm9996-201ENSMUST00000070359 913 ntBASIC12.16□□□□□ -0.46
Colca2F8VPY8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Colca2F8VPY8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms