Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf3c6Q9D8P7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.02□□□□□ -0.16
Gtf3c6Q9D8P7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gm6152-201ENSMUST00000151704 340 ntBASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gm27701-201ENSMUST00000184498 110 ntBASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gm18018-201ENSMUST00000198273 408 ntBASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf3c6Q9D8P7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm14350-201ENSMUST00000116642 640 ntBASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm8463-201ENSMUST00000208573 613 ntBASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf3c6Q9D8P7 Gm15544-201ENSMUST00000118776 1531 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms