Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nip7Q9CXK8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm12566-201ENSMUST00000121479 359 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.1■□□□□ 0.17
Nip7Q9CXK8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Gm8385-201ENSMUST00000058999 643 ntBASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Mir339-201ENSMUST00000083659 96 ntBASIC16.09■□□□□ 0.17
Nip7Q9CXK8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nip7Q9CXK8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms