Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Otud1Q9CUB6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Otud1Q9CUB6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Otud1Q9CUB6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm18054-201ENSMUST00000207539 555 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm19163-201ENSMUST00000223313 780 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Snora73a-201ENSMUST00000082453 205 ntBASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud1Q9CUB6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm6007-201ENSMUST00000208170 823 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.32□□□□□ -0.44
Otud1Q9CUB6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms