Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm12403-201ENSMUST00000121384 959 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm3436-201ENSMUST00000179930 840 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Krt88Q9CPR6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm25144-201ENSMUST00000179561 110 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm25352-201ENSMUST00000179815 110 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm38144-201ENSMUST00000192790 465 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm5779-201ENSMUST00000218467 910 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Matn2-203ENSMUST00000226766 3252 ntBASIC11.72□□□□□ -0.53
Krt88Q9CPR6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Krt88Q9CPR6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms