Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.81□□□□□ -0.04
Trim11Q99PQ2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim11Q99PQ2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Gm8463-201ENSMUST00000208573 613 ntBASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Gm6458-201ENSMUST00000211573 635 ntBASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim11Q99PQ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.79□□□□□ -0.04
Trim11Q99PQ2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gm28911-201ENSMUST00000188837 117 ntBASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.79□□□□□ -0.04
Trim11Q99PQ2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim11Q99PQ2 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim11Q99PQ2 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms