Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cstf3Q99LI7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cstf3Q99LI7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cstf3Q99LI7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cstf3Q99LI7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cstf3Q99LI7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Cstf3Q99LI7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Gm12859-201ENSMUST00000117834 427 ntBASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.57□□□□□ -0.4
Cstf3Q99LI7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cstf3Q99LI7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.56□□□□□ -0.4
Cstf3Q99LI7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms