Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb13Q91Y06 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb13Q91Y06 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb13Q91Y06 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb13Q91Y06 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Gm9908-201ENSMUST00000211534 448 ntBASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb13Q91Y06 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm13612-201ENSMUST00000119276 390 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm38671-201ENSMUST00000200573 130 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm45384-201ENSMUST00000210451 277 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gm18515-201ENSMUST00000219755 797 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 CT009764.1-201ENSMUST00000222260 483 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb13Q91Y06 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Gm11918-201ENSMUST00000121660 179 ntBASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Gm7287-201ENSMUST00000205267 602 ntBASIC13.1□□□□□ -0.31
Pcdhb13Q91Y06 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms