Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm23984-201ENSMUST00000157139 203 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm29608-201ENSMUST00000190444 463 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm26315-201ENSMUST00000083890 321 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Gm12091-201ENSMUST00000146791 830 ntBASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga11Q91XY8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm45668-201ENSMUST00000211271 493 ntBASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm6180-201ENSMUST00000065243 498 ntBASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhga11Q91XY8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms