Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rpap2Q8VC34 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Gm16177-201ENSMUST00000120728 718 ntBASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.25□□□□□ -0.13
Rpap2Q8VC34 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.25□□□□□ -0.13
Rpap2Q8VC34 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Rpap2Q8VC34 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm4984-201ENSMUST00000115987 360 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm13813-201ENSMUST00000120998 787 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm17208-201ENSMUST00000168388 535 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm37042-201ENSMUST00000193816 581 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpap2Q8VC34 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpap2Q8VC34 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpap2Q8VC34 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpap2Q8VC34 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpap2Q8VC34 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.23□□□□□ -0.13
Rpap2Q8VC34 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpap2Q8VC34 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms