Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slf1Q8R3P9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slf1Q8R3P9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slf1Q8R3P9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.15□□□□□ -0.3
Slf1Q8R3P9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.15□□□□□ -0.3
Slf1Q8R3P9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Slf1Q8R3P9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slf1Q8R3P9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slf1Q8R3P9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slf1Q8R3P9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slf1Q8R3P9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.14□□□□□ -0.31
Slf1Q8R3P9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Slf1Q8R3P9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm13616-201ENSMUST00000120600 222 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.13□□□□□ -0.31
Slf1Q8R3P9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms