Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Atf7Q8R0S1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.33■□□□□ 0.04
Atf7Q8R0S1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf7Q8R0S1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Gm12291-201ENSMUST00000121627 311 ntBASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf7Q8R0S1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm5035-201ENSMUST00000215581 927 ntBASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms