Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm5687-201ENSMUST00000118252 640 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Proscos-202ENSMUST00000178990 666 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm37424-201ENSMUST00000191727 561 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm6007-201ENSMUST00000208170 823 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.29□□□□□ -0.28
CopaQ8CIE6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CopaQ8CIE6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm13392-201ENSMUST00000117708 150 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm8062-201ENSMUST00000139696 444 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm22331-201ENSMUST00000158066 136 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.28□□□□□ -0.28
CopaQ8CIE6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopaQ8CIE6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms