Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam228aQ8CDW1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Fam228aQ8CDW1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Fam228aQ8CDW1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam228aQ8CDW1 Matn2-203ENSMUST00000226766 3252 ntBASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Pck2-205ENSMUST00000226352 2784 ntBASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam228aQ8CDW1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Gm14701-201ENSMUST00000117156 348 ntBASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Gm26464-201ENSMUST00000157094 305 ntBASIC13.62□□□□□ -0.23
Fam228aQ8CDW1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms