Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Gm24447-201ENSMUST00000083977 338 ntBASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm11424-201ENSMUST00000121929 829 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc87Q8CDL9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Gm8515-201ENSMUST00000194852 576 ntBASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc87Q8CDL9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms