Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vcpip1Q8CDG3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vcpip1Q8CDG3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcpip1Q8CDG3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.96□□□□□ -0.17
Vcpip1Q8CDG3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms