Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm8927-201ENSMUST00000181978 981 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm17795-201ENSMUST00000214505 757 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm3222-201ENSMUST00000071282 990 ntBASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rft1Q8C3B8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Gm6912-201ENSMUST00000117218 544 ntBASIC11.62□□□□□ -0.55
Rft1Q8C3B8 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms