Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm6180-201ENSMUST00000065243 498 ntBASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn3Q8BHH8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn3Q8BHH8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms