Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm5616-201ENSMUST00000165252 384 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm8741-201ENSMUST00000174736 384 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm9555-201ENSMUST00000200908 583 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm9211-201ENSMUST00000182882 975 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.86□□□□□ -0.67
Ttc28Q80XJ3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 AY036118-201ENSMUST00000200021 923 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm11450-201ENSMUST00000121144 333 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ttc28Q80XJ3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms