Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vrk1Q80X41 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Mir3102-201ENSMUST00000175555 104 ntBASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm37466-201ENSMUST00000195692 652 ntBASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Morn2-202ENSMUST00000227729 656 ntBASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.42□□□□□ -0.42
Vrk1Q80X41 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vrk1Q80X41 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm11978-201ENSMUST00000122315 466 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm25668-201ENSMUST00000157700 129 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm16570-201ENSMUST00000161951 436 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm17376-201ENSMUST00000166016 84 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm6082-201ENSMUST00000215204 454 ntBASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms