Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.59□□□□□ -0.71
Vma21Q78T54 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Vma21Q78T54 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.59□□□□□ -0.71
Vma21Q78T54 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.59□□□□□ -0.71
Vma21Q78T54 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.59□□□□□ -0.71
Vma21Q78T54 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vma21Q78T54 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Vma21Q78T54 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Vma21Q78T54 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Gm27306-201ENSMUST00000183970 107 ntBASIC10.58□□□□□ -0.72
Vma21Q78T54 Mir8102-201ENSMUST00000184148 139 ntBASIC10.58□□□□□ -0.72
Vma21Q78T54 Gm27989-201ENSMUST00000184721 107 ntBASIC10.58□□□□□ -0.72
Vma21Q78T54 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.58□□□□□ -0.72
Vma21Q78T54 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.58□□□□□ -0.72
Vma21Q78T54 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Vma21Q78T54 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.58□□□□□ -0.72
Vma21Q78T54 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vma21Q78T54 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm15376-201ENSMUST00000122258 783 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Gm28760-201ENSMUST00000185995 736 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.57□□□□□ -0.72
Vma21Q78T54 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vma21Q78T54 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms