Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm14201-201ENSMUST00000117627 289 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm38216-201ENSMUST00000194872 1214 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf8Q6DID3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm13408-201ENSMUST00000119822 798 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm13935-201ENSMUST00000121859 798 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm5070-201ENSMUST00000177599 862 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm44551-201ENSMUST00000208804 171 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm18730-201ENSMUST00000218038 343 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Ntng1-201ENSMUST00000051253 327 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Gm10312-201ENSMUST00000078515 489 ntBASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scaf8Q6DID3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Mir6958-201ENSMUST00000184207 73 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm37201-201ENSMUST00000191845 523 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm37666-201ENSMUST00000194110 866 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Gm17812-201ENSMUST00000204935 318 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.16■□□□□ 0.02
Scaf8Q6DID3 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.16■□□□□ 0.02
Scaf8Q6DID3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms